— Rational design of CRISPR/Cas target.
2025-06-22 00:38:08, GGGenome : Mouse genome, GRCm39/mm39 (Jun, 2020)
Summary:
Results:
Matches are highlighted with blue background.
Mismatches and in dels are marked in red.
CCGGGAGCCTGGCTTGGGACTGGTGTGTCT116971832 TTCAGGTGGTGCAGG
AGTTGTGTGGAACATTCTAGAAGATTGCCC129391588 TTCAGGTGGTGCTGG
TTATTACTTCCTATATCTCTGAACAACACA29376020 TTCAGGTGGTGCTGG
CTGAAAGATATGCTTGTTCTTCCAGGTGAC97841317 TTCAGGTGGTGCTGG
TACAATCTGCAAACATGTGAGAAAGAATTA122226916 TTCAGGTGGTGCCGG
AGGATCACCAGTGTGTGCCACCACTTGTAC118509590 TTCAGGTGGTGCTGG
TCCTCCGGCGTCAGGTTGAGCGCCTCGGGG75619398 TTCAGGTGGTGCTGG
CCAGCAACAGGCACTGAGAAATTCAGGGAA78982684 TTCAGGTGGTGCAGG
GTGTTTAGGCAAATGTCTGATGAATGTTAC9160829 TTCAGGTGGTGCTGG
GAAATATGCCATAGGAGTTCTGCTCTTTCG13548149 TTCAGGTGGTGCAGG
AAGAGGCTCAGAGTGCTCACCTGGTGGCCG75252456 TTCAGGTGGTGCTGG
AATATTTGTAAACTATCATCTATCTGAACT53899354 TTCAGGTGGTGCAGG
GCAGCTGGACTTGGTAATGTATGAGAATCA37370705 TTCAGGTGGTGCTGG
ATGTAGGGGTGTGGCTGTCAGTACACCTTC177549091 CCAGCACCACCTGAA
AATATTGTTAGCAGTAGGTTTGTGTAACCT20888963 CCTGCACCACCTGAA
ACTGCACATGCCAACTCATCCTGCAACCAC26494993 CCAGCACCACCTGAA
GCACTCTTAAAGAGGATCCATATTCTGTTC41464873 CCAGCACCACCTGAA
CTGCAGAGAACAGAGCAGGTAACCTGGACA104218073 CCTGCACCACCTGAA
CACCCCCATCCCAGCTCTCCCACTCACACC144116828 CCTGCACCACCTGAA
GTCTCTTAAATAGAACTGTGTTGTTCCCCT85046757 CCTGCACCACCTGAA
TTGGAAAGCACGGTCTTTCCTCTCTCCAGT95191240 CCGGCACCACCTGAA
GGGTAAGTACAGAGACTTGGGCCTGATTTG156264949 CCTGCACCACCTGAA
Data Export:
Maximum 100000 results can be retrieved in various formats shown below:
Debug Info:
Redirect URI : http://crispr.dbcls.jp /detail/en/mm39/TTCAGGTGGTGCNGGen |
db : mm39 |
k : 0 |
strand : TTCAGGTGGTGCNGG |
format : html |
download :
0.006 | 0.006 | search_start;
0.077 | 0.071 | search_plus_done; http://172.18.8.138:28851/match?q=TTCAGGTGGTGCNGG&k=0&no_gap=0&offset=0&limit=200
0.082 | 0.005 | search_minus_done; http://172.18.8.138:28851/match?q=CCNGCACCACCTGAA&k=0&no_gap=0&offset=0&limit=187
0.084 | 0.001 | cgi_end;
CRISPRdirect |
DBCLS
Creative Commons Attribution 4.0 International License (CC BY 4.0) .
If you use CRISPRdirect in your work, please cite:Bioinformatics , 31 , 1120-1123.
[Full Text]
— Rational design of CRISPR/Cas target.